STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW32803.1Hypothetical protein. (381 aa)    
Predicted Functional Partners:
SDW38003.1
Peptidase inhibitor I9; Belongs to the peptidase S8 family.
   
 0.757
SDW63062.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
 
 0.706
SDW26778.1
Endoglycosylceramidase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
  0.699
SDW62702.1
Pilus assembly protein FimV.
    
 
 0.612
SDX64959.1
Hypothetical protein.
   
 0.550
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.536
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.536
SDW76935.1
Protein of unknown function.
   
 0.494
SDX53895.1
Protein of unknown function.
   
 0.494
SDW15443.1
Iron complex outermembrane recepter protein.
    
 
 0.483
Your Current Organism:
Marinobacter mobilis
NCBI taxonomy Id: 488533
Other names: CGMCC 1.7059, JCM 15154, M. mobilis, Marinobacter mobilis Huo et al. 2008, Marinobacter sp. CN46, Marinobacter sp. CN71, strain CN46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.