STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW34858.1Hypothetical protein. (132 aa)    
Predicted Functional Partners:
SDW34895.1
Hypothetical protein.
  
  
 0.900
SDW34821.1
Hypothetical protein.
       0.739
SDW00682.1
Histidine triad (HIT) family protein.
  
  
 0.598
SDW58512.1
Diadenosine tetraphosphate (Ap4A) hydrolase.
  
  
 0.598
SDX00905.1
Histidine triad (HIT) family protein.
  
  
 0.598
SDX48723.1
Histidine triad (HIT) family protein.
  
  
 0.598
SDW34797.1
Calcineurin-like phosphoesterase.
       0.506
Your Current Organism:
Marinobacter mobilis
NCBI taxonomy Id: 488533
Other names: CGMCC 1.7059, JCM 15154, M. mobilis, Marinobacter mobilis Huo et al. 2008, Marinobacter sp. CN46, Marinobacter sp. CN71, strain CN46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.