STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW38836.1Transcriptional regulator, TetR family. (204 aa)    
Predicted Functional Partners:
SDW38799.1
Protein of unknown function.
 
   
 0.683
SDW38719.1
geranyl-CoA carboxylase beta subunit.
 
   
 0.652
SDW38757.1
Citronellol/citronellal dehydrogenase.
    
  0.561
SDW38672.1
citronellyl-CoA dehydrogenase.
 
     0.518
SDW38583.1
geranyl-CoA carboxylase alpha subunit.
   
 
 0.486
SDW38546.1
Citronellol/citronellal dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.439
SDW38873.1
Hypothetical protein.
       0.409
Your Current Organism:
Marinobacter mobilis
NCBI taxonomy Id: 488533
Other names: CGMCC 1.7059, JCM 15154, M. mobilis, Marinobacter mobilis Huo et al. 2008, Marinobacter sp. CN46, Marinobacter sp. CN71, strain CN46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.