STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW29056.1Hypothetical protein. (159 aa)    
Predicted Functional Partners:
SDW29024.1
Uncharacterized conserved protein YecE, DUF72 family.
       0.798
SDW99402.1
Pilus assembly protein CpaE.
  
     0.672
SDW27482.1
Hypothetical protein.
  
     0.551
SDW28984.1
Hypothetical protein.
       0.494
SDW29094.1
Polyketide cyclase / dehydrase and lipid transport.
       0.484
SDX15450.1
2-hydroxychromene-2-carboxylate isomerase.
  
     0.470
SDW27521.1
Protein of unknown function.
  
     0.420
SDW99260.1
Flp pilus assembly protein TadD, contains TPR repeats.
  
     0.419
SDW76804.1
HPP family protein.
  
     0.411
SDX53787.1
HPP family protein.
  
     0.411
Your Current Organism:
Marinobacter mobilis
NCBI taxonomy Id: 488533
Other names: CGMCC 1.7059, JCM 15154, M. mobilis, Marinobacter mobilis Huo et al. 2008, Marinobacter sp. CN46, Marinobacter sp. CN71, strain CN46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.