STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW54997.14a-hydroxytetrahydrobiopterin dehydratase. (125 aa)    
Predicted Functional Partners:
SDW38799.1
Protein of unknown function.
  
  
 0.626
SDW54959.1
Hypothetical protein.
       0.512
SDW54915.1
Protein ImuB.
       0.491
SDX13542.1
Chorismate mutase.
      
 0.454
SDW55032.1
Hypothetical protein.
       0.447
dnaE2
DNA polymerase III, alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.
       0.444
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
      
 0.436
SDX64360.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
 0.435
SDX70508.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
 0.425
SDW55076.1
Hypothetical protein.
       0.413
Your Current Organism:
Marinobacter mobilis
NCBI taxonomy Id: 488533
Other names: CGMCC 1.7059, JCM 15154, M. mobilis, Marinobacter mobilis Huo et al. 2008, Marinobacter sp. CN46, Marinobacter sp. CN71, strain CN46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.