Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW09464.1 | SDW09524.1 | SAMN04487960_101303 | SAMN04487960_101304 | Arginine N-succinyltransferase. | Arginine N-succinyltransferase. | 0.983 |
SDW09464.1 | SDW82280.1 | SAMN04487960_101303 | SAMN04487960_104229 | Arginine N-succinyltransferase. | Arginine N-succinyltransferase. | 0.968 |
SDW09464.1 | argD | SAMN04487960_101303 | SAMN04487960_101302 | Arginine N-succinyltransferase. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.924 |
SDW09464.1 | argH | SAMN04487960_101303 | SAMN04487960_105114 | Arginine N-succinyltransferase. | Argininosuccinate lyase. | 0.930 |
SDW09464.1 | astB | SAMN04487960_101303 | SAMN04487960_101306 | Arginine N-succinyltransferase. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.999 |
SDW09464.1 | astD | SAMN04487960_101303 | SAMN04487960_101305 | Arginine N-succinyltransferase. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.903 |
SDW09464.1 | astE | SAMN04487960_101303 | SAMN04487960_101310 | Arginine N-succinyltransferase. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.915 |
SDW09524.1 | SDW09464.1 | SAMN04487960_101304 | SAMN04487960_101303 | Arginine N-succinyltransferase. | Arginine N-succinyltransferase. | 0.983 |
SDW09524.1 | SDW82280.1 | SAMN04487960_101304 | SAMN04487960_104229 | Arginine N-succinyltransferase. | Arginine N-succinyltransferase. | 0.806 |
SDW09524.1 | argD | SAMN04487960_101304 | SAMN04487960_101302 | Arginine N-succinyltransferase. | acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily. | 0.908 |
SDW09524.1 | argH | SAMN04487960_101304 | SAMN04487960_105114 | Arginine N-succinyltransferase. | Argininosuccinate lyase. | 0.768 |
SDW09524.1 | astB | SAMN04487960_101304 | SAMN04487960_101306 | Arginine N-succinyltransferase. | Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2). | 0.998 |
SDW09524.1 | astD | SAMN04487960_101304 | SAMN04487960_101305 | Arginine N-succinyltransferase. | Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. | 0.932 |
SDW09524.1 | astE | SAMN04487960_101304 | SAMN04487960_101310 | Arginine N-succinyltransferase. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.919 |
SDW82243.1 | SDW82280.1 | SAMN04487960_104228 | SAMN04487960_104229 | Protein of unknown function. | Arginine N-succinyltransferase. | 0.882 |
SDW82243.1 | SDW82320.1 | SAMN04487960_104228 | SAMN04487960_104230 | Protein of unknown function. | DNA-binding transcriptional regulator, Lrp family. | 0.547 |
SDW82243.1 | astE | SAMN04487960_104228 | SAMN04487960_101310 | Protein of unknown function. | Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily. | 0.570 |
SDW82280.1 | SDW09464.1 | SAMN04487960_104229 | SAMN04487960_101303 | Arginine N-succinyltransferase. | Arginine N-succinyltransferase. | 0.968 |
SDW82280.1 | SDW09524.1 | SAMN04487960_104229 | SAMN04487960_101304 | Arginine N-succinyltransferase. | Arginine N-succinyltransferase. | 0.806 |
SDW82280.1 | SDW82243.1 | SAMN04487960_104229 | SAMN04487960_104228 | Arginine N-succinyltransferase. | Protein of unknown function. | 0.882 |
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