STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX19910.1Two component transcriptional regulator, LuxR family. (208 aa)    
Predicted Functional Partners:
SDX19880.1
PAS domain S-box-containing protein.
 
 0.994
SDX33044.1
PAS domain S-box-containing protein.
 
 0.955
SDW05541.1
PAS domain S-box-containing protein.
 
 
 0.948
SDV99900.1
PAS domain S-box-containing protein.
 
 
 0.879
SDX15548.1
PAS domain S-box-containing protein.
 
 
 0.875
SDX20525.1
PAS domain S-box-containing protein.
 
 0.875
SDW51280.1
PAS domain S-box-containing protein.
  
 0.872
SDW75047.1
PAS domain S-box-containing protein.
 
 
 0.871
SDX52312.1
PAS domain S-box-containing protein.
 
 
 0.871
SDW98973.1
PAS domain-containing protein.
 
 0.864
Your Current Organism:
Marinobacter mobilis
NCBI taxonomy Id: 488533
Other names: CGMCC 1.7059, JCM 15154, M. mobilis, Marinobacter mobilis Huo et al. 2008, Marinobacter sp. CN46, Marinobacter sp. CN71, strain CN46
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.