STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX40618.1Alkane 1-monooxygenase. (389 aa)    
Predicted Functional Partners:
SDX40658.1
3-phenylpropionate/trans-cinnamate dioxygenase ferredoxin reductase subunit.
  
  0.807
SDW16000.1
Ferredoxin-NADP reductase.
 
 0.672
SDW96547.1
2-hydroxymuconate semialdehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
  0.551
SDX40686.1
Transcriptional regulator, AraC family.
 
     0.541
SDX49637.1
Hypothetical protein.
  
     0.528
SDX60741.1
Fatty acid desaturase.
  
     0.518
SDX15328.1
Ferredoxin-NADP reductase.
 
 
 0.492
SDW28172.1
Predicted metal-dependent hydrolase.
  
     0.483
SDW98549.1
Fatty acid desaturase.
  
     0.437
SDW35355.1
Hypothetical protein.
  
     0.433
Your Current Organism:
Marinobacter mobilis
NCBI taxonomy Id: 488533
Other names: CGMCC 1.7059, JCM 15154, M. mobilis, Marinobacter mobilis Huo et al. 2008, Marinobacter sp. CN46, Marinobacter sp. CN71, strain CN46
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.