STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX40905.1Hypothetical protein. (2451 aa)    
Predicted Functional Partners:
SDX40944.1
Hypothetical protein.
       0.761
SDW07056.1
WD40-like Beta Propeller Repeat.
  
 0.667
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.667
SDX40973.1
Hypothetical protein.
     
 0.621
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.559
SDX07360.1
Periplasmic chaperone for outer membrane proteins Skp.
  
 
 0.529
rpsF
SSU ribosomal protein S6P; Binds together with S18 to 16S ribosomal RNA.
   
   0.450
SDW77558.1
Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).
   
 
 0.432
SDW14171.1
OmpA family protein.
    
 0.426
SDW39719.1
Chemotaxis protein MotB.
    
 0.426
Your Current Organism:
Marinobacter mobilis
NCBI taxonomy Id: 488533
Other names: CGMCC 1.7059, JCM 15154, M. mobilis, Marinobacter mobilis Huo et al. 2008, Marinobacter sp. CN46, Marinobacter sp. CN71, strain CN46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.