Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDW00207.1 | SDX70322.1 | SAMN04487960_10149 | SAMN04487960_11412 | Ankyrin repeat. | Acetoin utilization deacetylase AcuC. | 0.830 |
SDW00207.1 | htpG | SAMN04487960_10149 | SAMN04487960_106257 | Ankyrin repeat. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.722 |
SDW00207.1 | rapA | SAMN04487960_10149 | SAMN04487960_10178 | Ankyrin repeat. | ATP-dependent helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.991 |
SDW38040.1 | SDX22662.1 | SAMN04487960_102317 | SAMN04487960_107132 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.463 |
SDW38040.1 | SDX70322.1 | SAMN04487960_102317 | SAMN04487960_11412 | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Acetoin utilization deacetylase AcuC. | 0.815 |
SDW64728.1 | SDX70322.1 | SAMN04487960_103373 | SAMN04487960_11412 | Poly(hydroxyalkanoate) granule-associated protein. | Acetoin utilization deacetylase AcuC. | 0.811 |
SDW64728.1 | rapA | SAMN04487960_103373 | SAMN04487960_10178 | Poly(hydroxyalkanoate) granule-associated protein. | ATP-dependent helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.473 |
SDX22662.1 | SDW38040.1 | SAMN04487960_107132 | SAMN04487960_102317 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.463 |
SDX22662.1 | SDX70322.1 | SAMN04487960_107132 | SAMN04487960_11412 | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | Acetoin utilization deacetylase AcuC. | 0.826 |
SDX70322.1 | SDW00207.1 | SAMN04487960_11412 | SAMN04487960_10149 | Acetoin utilization deacetylase AcuC. | Ankyrin repeat. | 0.830 |
SDX70322.1 | SDW38040.1 | SAMN04487960_11412 | SAMN04487960_102317 | Acetoin utilization deacetylase AcuC. | D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.815 |
SDX70322.1 | SDW64728.1 | SAMN04487960_11412 | SAMN04487960_103373 | Acetoin utilization deacetylase AcuC. | Poly(hydroxyalkanoate) granule-associated protein. | 0.811 |
SDX70322.1 | SDX22662.1 | SAMN04487960_11412 | SAMN04487960_107132 | Acetoin utilization deacetylase AcuC. | Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.826 |
SDX70322.1 | SDX70354.1 | SAMN04487960_11412 | SAMN04487960_11413 | Acetoin utilization deacetylase AcuC. | Acetyltransferase. | 0.815 |
SDX70322.1 | SDX70783.1 | SAMN04487960_11412 | SAMN04487960_11428 | Acetoin utilization deacetylase AcuC. | Protein of unknown function. | 0.838 |
SDX70322.1 | htpG | SAMN04487960_11412 | SAMN04487960_106257 | Acetoin utilization deacetylase AcuC. | Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity. | 0.906 |
SDX70322.1 | pdxB | SAMN04487960_11412 | SAMN04487960_103135 | Acetoin utilization deacetylase AcuC. | 4-phosphoerythronate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate. | 0.815 |
SDX70322.1 | rapA | SAMN04487960_11412 | SAMN04487960_10178 | Acetoin utilization deacetylase AcuC. | ATP-dependent helicase HepA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily. | 0.990 |
SDX70322.1 | smc | SAMN04487960_11412 | SAMN04487960_10978 | Acetoin utilization deacetylase AcuC. | Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family. | 0.811 |
SDX70354.1 | SDX70322.1 | SAMN04487960_11413 | SAMN04487960_11412 | Acetyltransferase. | Acetoin utilization deacetylase AcuC. | 0.815 |
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