Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL82200.1 | SFL85192.1 | SAMN04487963_0082 | SAMN04487963_0224 | Protein of unknown function. | Zinc carboxypeptidase. | 0.458 |
SFL85129.1 | SFL85148.1 | SAMN04487963_0221 | SAMN04487963_0222 | Glutathione S-transferase; Belongs to the GST superfamily. | Glutathione S-transferase. | 0.838 |
SFL85129.1 | SFL85174.1 | SAMN04487963_0221 | SAMN04487963_0223 | Glutathione S-transferase; Belongs to the GST superfamily. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.526 |
SFL85129.1 | SFL85192.1 | SAMN04487963_0221 | SAMN04487963_0224 | Glutathione S-transferase; Belongs to the GST superfamily. | Zinc carboxypeptidase. | 0.516 |
SFL85148.1 | SFL85129.1 | SAMN04487963_0222 | SAMN04487963_0221 | Glutathione S-transferase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.838 |
SFL85148.1 | SFL85174.1 | SAMN04487963_0222 | SAMN04487963_0223 | Glutathione S-transferase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.582 |
SFL85148.1 | SFL85192.1 | SAMN04487963_0222 | SAMN04487963_0224 | Glutathione S-transferase. | Zinc carboxypeptidase. | 0.574 |
SFL85148.1 | SFL85214.1 | SAMN04487963_0222 | SAMN04487963_0225 | Glutathione S-transferase. | Heat shock protein HslJ. | 0.470 |
SFL85174.1 | SFL85129.1 | SAMN04487963_0223 | SAMN04487963_0221 | Pimeloyl-ACP methyl ester carboxylesterase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.526 |
SFL85174.1 | SFL85148.1 | SAMN04487963_0223 | SAMN04487963_0222 | Pimeloyl-ACP methyl ester carboxylesterase. | Glutathione S-transferase. | 0.582 |
SFL85174.1 | SFL85192.1 | SAMN04487963_0223 | SAMN04487963_0224 | Pimeloyl-ACP methyl ester carboxylesterase. | Zinc carboxypeptidase. | 0.956 |
SFL85174.1 | SFL85214.1 | SAMN04487963_0223 | SAMN04487963_0225 | Pimeloyl-ACP methyl ester carboxylesterase. | Heat shock protein HslJ. | 0.508 |
SFL85192.1 | SFL82200.1 | SAMN04487963_0224 | SAMN04487963_0082 | Zinc carboxypeptidase. | Protein of unknown function. | 0.458 |
SFL85192.1 | SFL85129.1 | SAMN04487963_0224 | SAMN04487963_0221 | Zinc carboxypeptidase. | Glutathione S-transferase; Belongs to the GST superfamily. | 0.516 |
SFL85192.1 | SFL85148.1 | SAMN04487963_0224 | SAMN04487963_0222 | Zinc carboxypeptidase. | Glutathione S-transferase. | 0.574 |
SFL85192.1 | SFL85174.1 | SAMN04487963_0224 | SAMN04487963_0223 | Zinc carboxypeptidase. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.956 |
SFL85192.1 | SFL85214.1 | SAMN04487963_0224 | SAMN04487963_0225 | Zinc carboxypeptidase. | Heat shock protein HslJ. | 0.508 |
SFL85192.1 | SFM13614.1 | SAMN04487963_0224 | SAMN04487963_1319 | Zinc carboxypeptidase. | Z1 domain-containing protein. | 0.663 |
SFL85192.1 | era | SAMN04487963_0224 | SAMN04487963_1227 | Zinc carboxypeptidase. | GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.717 |
SFL85192.1 | ndk | SAMN04487963_0224 | SAMN04487963_1867 | Zinc carboxypeptidase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.692 |
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