Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL87443.1 | SFL87453.1 | SAMN04487963_0345 | SAMN04487963_0346 | Hypothetical protein. | Transglycosylase associated protein. | 0.784 |
SFL87443.1 | SFL87475.1 | SAMN04487963_0345 | SAMN04487963_0347 | Hypothetical protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.675 |
SFL87443.1 | SFL87496.1 | SAMN04487963_0345 | SAMN04487963_0348 | Hypothetical protein. | Sortase A. | 0.550 |
SFL87443.1 | SFL87511.1 | SAMN04487963_0345 | SAMN04487963_0349 | Hypothetical protein. | Ca-activated chloride channel family protein. | 0.550 |
SFL87453.1 | SFL87443.1 | SAMN04487963_0346 | SAMN04487963_0345 | Transglycosylase associated protein. | Hypothetical protein. | 0.784 |
SFL87453.1 | SFL87475.1 | SAMN04487963_0346 | SAMN04487963_0347 | Transglycosylase associated protein. | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.675 |
SFL87453.1 | SFL87496.1 | SAMN04487963_0346 | SAMN04487963_0348 | Transglycosylase associated protein. | Sortase A. | 0.660 |
SFL87453.1 | SFL87511.1 | SAMN04487963_0346 | SAMN04487963_0349 | Transglycosylase associated protein. | Ca-activated chloride channel family protein. | 0.550 |
SFL87475.1 | SFL87443.1 | SAMN04487963_0347 | SAMN04487963_0345 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | Hypothetical protein. | 0.675 |
SFL87475.1 | SFL87453.1 | SAMN04487963_0347 | SAMN04487963_0346 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | Transglycosylase associated protein. | 0.675 |
SFL87475.1 | SFL87496.1 | SAMN04487963_0347 | SAMN04487963_0348 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | Sortase A. | 0.627 |
SFL87475.1 | SFL87511.1 | SAMN04487963_0347 | SAMN04487963_0349 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | Ca-activated chloride channel family protein. | 0.627 |
SFL87475.1 | SFL87522.1 | SAMN04487963_0347 | SAMN04487963_0350 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | Two-component system, OmpR family, response regulator. | 0.422 |
SFL87475.1 | SFL87542.1 | SAMN04487963_0347 | SAMN04487963_0351 | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | Signal transduction histidine kinase. | 0.423 |
SFL87496.1 | SFL87443.1 | SAMN04487963_0348 | SAMN04487963_0345 | Sortase A. | Hypothetical protein. | 0.550 |
SFL87496.1 | SFL87453.1 | SAMN04487963_0348 | SAMN04487963_0346 | Sortase A. | Transglycosylase associated protein. | 0.660 |
SFL87496.1 | SFL87475.1 | SAMN04487963_0348 | SAMN04487963_0347 | Sortase A. | 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family. | 0.627 |
SFL87496.1 | SFL87511.1 | SAMN04487963_0348 | SAMN04487963_0349 | Sortase A. | Ca-activated chloride channel family protein. | 0.969 |
SFL87496.1 | SFL87522.1 | SAMN04487963_0348 | SAMN04487963_0350 | Sortase A. | Two-component system, OmpR family, response regulator. | 0.784 |
SFL87496.1 | SFL87542.1 | SAMN04487963_0348 | SAMN04487963_0351 | Sortase A. | Signal transduction histidine kinase. | 0.844 |
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