STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL92638.1Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). (279 aa)    
Predicted Functional Partners:
SFM42385.1
TPR repeat-containing protein.
  
     0.756
SFM51494.1
Hypothetical protein.
  
     0.737
SFM17732.1
Hook-length control protein FliK.
  
     0.722
SFM43105.1
FecR family protein.
  
     0.711
SFM12462.1
Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase.
  
     0.702
SFM12627.1
Protein of unknown function.
  
     0.700
SFL87393.1
Tetratricopeptide repeat-containing protein.
  
     0.693
SFL92734.1
Signal transduction histidine kinase.
   
 0.689
SFM68171.1
Protein of unknown function.
  
     0.675
SFM54092.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
  
 
   0.672
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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