Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL87393.1 | SFL92638.1 | SAMN04487963_0342 | SAMN04487963_0577 | Tetratricopeptide repeat-containing protein. | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | 0.693 |
SFL87393.1 | SFL92734.1 | SAMN04487963_0342 | SAMN04487963_0581 | Tetratricopeptide repeat-containing protein. | Signal transduction histidine kinase. | 0.460 |
SFL87393.1 | SFM12462.1 | SAMN04487963_0342 | SAMN04487963_1248 | Tetratricopeptide repeat-containing protein. | Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase. | 0.665 |
SFL87393.1 | SFM12627.1 | SAMN04487963_0342 | SAMN04487963_1257 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.500 |
SFL87393.1 | SFM17732.1 | SAMN04487963_0342 | SAMN04487963_1553 | Tetratricopeptide repeat-containing protein. | Hook-length control protein FliK. | 0.696 |
SFL87393.1 | SFM42385.1 | SAMN04487963_0342 | SAMN04487963_2525 | Tetratricopeptide repeat-containing protein. | TPR repeat-containing protein. | 0.756 |
SFL87393.1 | SFM43105.1 | SAMN04487963_0342 | SAMN04487963_2560 | Tetratricopeptide repeat-containing protein. | FecR family protein. | 0.722 |
SFL87393.1 | SFM51494.1 | SAMN04487963_0342 | SAMN04487963_2755 | Tetratricopeptide repeat-containing protein. | Hypothetical protein. | 0.710 |
SFL87393.1 | SFM54092.1 | SAMN04487963_0342 | SAMN04487963_2876 | Tetratricopeptide repeat-containing protein. | Putative PEP-CTERM system TPR-repeat lipoprotein. | 0.512 |
SFL87393.1 | SFM68171.1 | SAMN04487963_0342 | SAMN04487963_3333 | Tetratricopeptide repeat-containing protein. | Protein of unknown function. | 0.651 |
SFL92638.1 | SFL87393.1 | SAMN04487963_0577 | SAMN04487963_0342 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | Tetratricopeptide repeat-containing protein. | 0.693 |
SFL92638.1 | SFL92734.1 | SAMN04487963_0577 | SAMN04487963_0581 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | Signal transduction histidine kinase. | 0.689 |
SFL92638.1 | SFM12462.1 | SAMN04487963_0577 | SAMN04487963_1248 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase. | 0.702 |
SFL92638.1 | SFM12627.1 | SAMN04487963_0577 | SAMN04487963_1257 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | Protein of unknown function. | 0.700 |
SFL92638.1 | SFM17732.1 | SAMN04487963_0577 | SAMN04487963_1553 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | Hook-length control protein FliK. | 0.722 |
SFL92638.1 | SFM42385.1 | SAMN04487963_0577 | SAMN04487963_2525 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | TPR repeat-containing protein. | 0.756 |
SFL92638.1 | SFM43105.1 | SAMN04487963_0577 | SAMN04487963_2560 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | FecR family protein. | 0.711 |
SFL92638.1 | SFM51494.1 | SAMN04487963_0577 | SAMN04487963_2755 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | Hypothetical protein. | 0.737 |
SFL92638.1 | SFM54092.1 | SAMN04487963_0577 | SAMN04487963_2876 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | Putative PEP-CTERM system TPR-repeat lipoprotein. | 0.672 |
SFL92638.1 | SFM68171.1 | SAMN04487963_0577 | SAMN04487963_3333 | Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-). | Protein of unknown function. | 0.675 |
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