Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL95426.1 | SFL95441.1 | SAMN04487963_0711 | SAMN04487963_0712 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.535 |
SFL95426.1 | SFM12779.1 | SAMN04487963_0711 | SAMN04487963_1267 | Hypothetical protein. | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | 0.428 |
SFL95426.1 | SFM14016.1 | SAMN04487963_0711 | SAMN04487963_1342 | Hypothetical protein. | Transcriptional regulator, AraC family. | 0.596 |
SFL95426.1 | SFM33027.1 | SAMN04487963_0711 | SAMN04487963_2086 | Hypothetical protein. | Predicted lactoylglutathione lyase. | 0.429 |
SFL95426.1 | SFM74519.1 | SAMN04487963_0711 | SAMN04487963_3562 | Hypothetical protein. | Haloalkane dehalogenase. | 0.406 |
SFL95426.1 | SFM76002.1 | SAMN04487963_0711 | SAMN04487963_3625 | Hypothetical protein. | Mechanosensitive ion channel. | 0.426 |
SFL95426.1 | guaA | SAMN04487963_0711 | SAMN04487963_2800 | Hypothetical protein. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.528 |
SFL95441.1 | SFL95426.1 | SAMN04487963_0712 | SAMN04487963_0711 | Transcriptional regulator, TetR family. | Hypothetical protein. | 0.535 |
SFM12779.1 | SFL95426.1 | SAMN04487963_1267 | SAMN04487963_0711 | D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4). | Hypothetical protein. | 0.428 |
SFM14016.1 | SFL95426.1 | SAMN04487963_1342 | SAMN04487963_0711 | Transcriptional regulator, AraC family. | Hypothetical protein. | 0.596 |
SFM33027.1 | SFL95426.1 | SAMN04487963_2086 | SAMN04487963_0711 | Predicted lactoylglutathione lyase. | Hypothetical protein. | 0.429 |
SFM74519.1 | SFL95426.1 | SAMN04487963_3562 | SAMN04487963_0711 | Haloalkane dehalogenase. | Hypothetical protein. | 0.406 |
SFM74519.1 | guaA | SAMN04487963_3562 | SAMN04487963_2800 | Haloalkane dehalogenase. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.445 |
SFM76002.1 | SFL95426.1 | SAMN04487963_3625 | SAMN04487963_0711 | Mechanosensitive ion channel. | Hypothetical protein. | 0.426 |
guaA | SFL95426.1 | SAMN04487963_2800 | SAMN04487963_0711 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Hypothetical protein. | 0.528 |
guaA | SFM74519.1 | SAMN04487963_2800 | SAMN04487963_3562 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Haloalkane dehalogenase. | 0.445 |