STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFL99891.1Polar amino acid transport system substrate-binding protein. (270 aa)    
Predicted Functional Partners:
SFL84084.1
PAS domain S-box-containing protein.
   
 0.609
SFL99907.1
Spermidine/putrescine transport system substrate-binding protein.
 
     0.590
SFL92734.1
Signal transduction histidine kinase.
   
 0.587
SFM26543.1
Signal transduction histidine kinase.
   
 0.587
SFM48703.1
PAS domain S-box-containing protein.
  
 0.579
SFM62972.1
PAS domain S-box-containing protein.
 
 
 0.567
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
    
 0.544
SFM12182.1
Two-component system, NarL family, sensor histidine kinase BarA.
   
 0.506
SFM20569.1
Chorismate mutase.
     
 0.506
SFL99928.1
Spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.494
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.