Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM12333.1 | SFM12364.1 | SAMN04487963_1240 | SAMN04487963_1242 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | Hypothetical protein. | 0.487 |
SFM12333.1 | adk | SAMN04487963_1240 | SAMN04487963_1239 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.809 |
SFM12333.1 | rsmJ | SAMN04487963_1240 | SAMN04487963_1243 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 16S rRNA (guanine1516-N2)-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.561 |
SFM12333.1 | uppP | SAMN04487963_1240 | SAMN04487963_1241 | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.708 |
SFM12364.1 | SFM12333.1 | SAMN04487963_1242 | SAMN04487963_1240 | Hypothetical protein. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.487 |
SFM12364.1 | adk | SAMN04487963_1242 | SAMN04487963_1239 | Hypothetical protein. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.487 |
SFM12364.1 | rsmJ | SAMN04487963_1242 | SAMN04487963_1243 | Hypothetical protein. | 16S rRNA (guanine1516-N2)-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.784 |
SFM12364.1 | uppP | SAMN04487963_1242 | SAMN04487963_1241 | Hypothetical protein. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.559 |
adk | SFM12333.1 | SAMN04487963_1239 | SAMN04487963_1240 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.809 |
adk | SFM12364.1 | SAMN04487963_1239 | SAMN04487963_1242 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Hypothetical protein. | 0.487 |
adk | rsmJ | SAMN04487963_1239 | SAMN04487963_1243 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 16S rRNA (guanine1516-N2)-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.554 |
adk | uppP | SAMN04487963_1239 | SAMN04487963_1241 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.704 |
rsmJ | SFM12333.1 | SAMN04487963_1243 | SAMN04487963_1240 | 16S rRNA (guanine1516-N2)-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.561 |
rsmJ | SFM12364.1 | SAMN04487963_1243 | SAMN04487963_1242 | 16S rRNA (guanine1516-N2)-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Hypothetical protein. | 0.784 |
rsmJ | adk | SAMN04487963_1243 | SAMN04487963_1239 | 16S rRNA (guanine1516-N2)-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.554 |
rsmJ | uppP | SAMN04487963_1243 | SAMN04487963_1241 | 16S rRNA (guanine1516-N2)-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 0.756 |
uppP | SFM12333.1 | SAMN04487963_1241 | SAMN04487963_1240 | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | tRNA threonylcarbamoyladenosine biosynthesis protein TsaB. | 0.708 |
uppP | SFM12364.1 | SAMN04487963_1241 | SAMN04487963_1242 | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | Hypothetical protein. | 0.559 |
uppP | adk | SAMN04487963_1241 | SAMN04487963_1239 | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.704 |
uppP | rsmJ | SAMN04487963_1241 | SAMN04487963_1243 | Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family. | 16S rRNA (guanine1516-N2)-methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA. | 0.756 |