Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL87711.1 | SFL87728.1 | SAMN04487963_0361 | SAMN04487963_0362 | ATPase family associated with various cellular activities (AAA). | Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain. | 0.895 |
SFL87711.1 | SFM17694.1 | SAMN04487963_0361 | SAMN04487963_1551 | ATPase family associated with various cellular activities (AAA). | MoxR-like ATPase. | 0.528 |
SFL87711.1 | SFM37159.1 | SAMN04487963_0361 | SAMN04487963_2283 | ATPase family associated with various cellular activities (AAA). | Hypothetical protein. | 0.506 |
SFL87728.1 | SFL87711.1 | SAMN04487963_0362 | SAMN04487963_0361 | Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain. | ATPase family associated with various cellular activities (AAA). | 0.895 |
SFL87728.1 | SFM17694.1 | SAMN04487963_0362 | SAMN04487963_1551 | Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain. | MoxR-like ATPase. | 0.566 |
SFL87728.1 | SFM32954.1 | SAMN04487963_0362 | SAMN04487963_2082 | Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain. | Hypothetical protein. | 0.489 |
SFL87728.1 | SFM37159.1 | SAMN04487963_0362 | SAMN04487963_2283 | Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain. | Hypothetical protein. | 0.567 |
SFM17628.1 | SFM17652.1 | SAMN04487963_1548 | SAMN04487963_1549 | Purine-binding chemotaxis protein CheW. | Protein of unknown function. | 0.732 |
SFM17628.1 | SFM17672.1 | SAMN04487963_1548 | SAMN04487963_1550 | Purine-binding chemotaxis protein CheW. | Type IV pilus assembly protein PilB. | 0.445 |
SFM17628.1 | SFM17694.1 | SAMN04487963_1548 | SAMN04487963_1551 | Purine-binding chemotaxis protein CheW. | MoxR-like ATPase. | 0.445 |
SFM17652.1 | SFM17628.1 | SAMN04487963_1549 | SAMN04487963_1548 | Protein of unknown function. | Purine-binding chemotaxis protein CheW. | 0.732 |
SFM17652.1 | SFM17672.1 | SAMN04487963_1549 | SAMN04487963_1550 | Protein of unknown function. | Type IV pilus assembly protein PilB. | 0.586 |
SFM17652.1 | SFM17694.1 | SAMN04487963_1549 | SAMN04487963_1551 | Protein of unknown function. | MoxR-like ATPase. | 0.586 |
SFM17672.1 | SFM17628.1 | SAMN04487963_1550 | SAMN04487963_1548 | Type IV pilus assembly protein PilB. | Purine-binding chemotaxis protein CheW. | 0.445 |
SFM17672.1 | SFM17652.1 | SAMN04487963_1550 | SAMN04487963_1549 | Type IV pilus assembly protein PilB. | Protein of unknown function. | 0.586 |
SFM17672.1 | SFM17694.1 | SAMN04487963_1550 | SAMN04487963_1551 | Type IV pilus assembly protein PilB. | MoxR-like ATPase. | 0.808 |
SFM17694.1 | SFL87711.1 | SAMN04487963_1551 | SAMN04487963_0361 | MoxR-like ATPase. | ATPase family associated with various cellular activities (AAA). | 0.528 |
SFM17694.1 | SFL87728.1 | SAMN04487963_1551 | SAMN04487963_0362 | MoxR-like ATPase. | Uncharacterized membrane protein YqiK, contains Band7/PHB/SPFH domain. | 0.566 |
SFM17694.1 | SFM17628.1 | SAMN04487963_1551 | SAMN04487963_1548 | MoxR-like ATPase. | Purine-binding chemotaxis protein CheW. | 0.445 |
SFM17694.1 | SFM17652.1 | SAMN04487963_1551 | SAMN04487963_1549 | MoxR-like ATPase. | Protein of unknown function. | 0.586 |
page 1 of 2