STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM20909.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
SFM42329.1
H-NS histone family protein.
  
     0.735
SFM42385.1
TPR repeat-containing protein.
  
     0.735
SFL95825.1
Hypothetical protein.
  
     0.732
SFL86086.1
Hypothetical protein.
  
     0.728
SFL87119.1
DNA helicase-2 / ATP-dependent DNA helicase PcrA.
  
     0.696
SFM41600.1
YfaZ precursor.
  
     0.691
SFM54421.1
TIGR03503 family protein.
  
     0.680
SFM62468.1
Outer membrane protein (porin).
  
     0.678
SFM51494.1
Hypothetical protein.
  
     0.674
SFM19543.1
Uncharacterized protein; Belongs to the UPF0149 family.
  
     0.668
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.