STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM26025.1Hypothetical protein. (331 aa)    
Predicted Functional Partners:
SFM26046.1
Iron complex outermembrane recepter protein.
 
     0.894
SFM26001.1
Signal transduction histidine kinase.
    
  0.821
SFM23262.1
Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.710
SFL87335.1
PAS domain S-box-containing protein.
    
  0.695
SFL84084.1
PAS domain S-box-containing protein.
    
  0.644
SFM41681.1
Hypothetical protein.
  
     0.642
SFM00962.1
TIGR02444 family protein.
  
     0.640
SFL92734.1
Signal transduction histidine kinase.
    
  0.627
SFM26543.1
Signal transduction histidine kinase.
    
  0.627
SFL89385.1
Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator).
 
  
  0.593
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.