Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM33160.1 | SFM33181.1 | SAMN04487963_2093 | SAMN04487963_2094 | Hypothetical protein. | Paraquat-inducible protein B; Manually curated. | 0.943 |
SFM33160.1 | SFM33204.1 | SAMN04487963_2093 | SAMN04487963_2095 | Hypothetical protein. | Paraquat-inducible protein A. | 0.948 |
SFM33160.1 | SFM33222.1 | SAMN04487963_2093 | SAMN04487963_2096 | Hypothetical protein. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.460 |
SFM33160.1 | SFM33244.1 | SAMN04487963_2093 | SAMN04487963_2097 | Hypothetical protein. | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | 0.417 |
SFM33160.1 | SFM56923.1 | SAMN04487963_2093 | SAMN04487963_3008 | Hypothetical protein. | Hypothetical protein. | 0.422 |
SFM33181.1 | SFM33160.1 | SAMN04487963_2094 | SAMN04487963_2093 | Paraquat-inducible protein B; Manually curated. | Hypothetical protein. | 0.943 |
SFM33181.1 | SFM33204.1 | SAMN04487963_2094 | SAMN04487963_2095 | Paraquat-inducible protein B; Manually curated. | Paraquat-inducible protein A. | 0.963 |
SFM33181.1 | SFM33222.1 | SAMN04487963_2094 | SAMN04487963_2096 | Paraquat-inducible protein B; Manually curated. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.460 |
SFM33181.1 | SFM33244.1 | SAMN04487963_2094 | SAMN04487963_2097 | Paraquat-inducible protein B; Manually curated. | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | 0.417 |
SFM33181.1 | SFM56923.1 | SAMN04487963_2094 | SAMN04487963_3008 | Paraquat-inducible protein B; Manually curated. | Hypothetical protein. | 0.537 |
SFM33204.1 | SFM33160.1 | SAMN04487963_2095 | SAMN04487963_2093 | Paraquat-inducible protein A. | Hypothetical protein. | 0.948 |
SFM33204.1 | SFM33181.1 | SAMN04487963_2095 | SAMN04487963_2094 | Paraquat-inducible protein A. | Paraquat-inducible protein B; Manually curated. | 0.963 |
SFM33204.1 | SFM33222.1 | SAMN04487963_2095 | SAMN04487963_2096 | Paraquat-inducible protein A. | Pimeloyl-ACP methyl ester carboxylesterase. | 0.460 |
SFM33204.1 | SFM33244.1 | SAMN04487963_2095 | SAMN04487963_2097 | Paraquat-inducible protein A. | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | 0.417 |
SFM33204.1 | SFM56923.1 | SAMN04487963_2095 | SAMN04487963_3008 | Paraquat-inducible protein A. | Hypothetical protein. | 0.543 |
SFM33204.1 | lipB | SAMN04487963_2095 | SAMN04487963_3582 | Paraquat-inducible protein A. | Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.649 |
SFM33222.1 | SFM33160.1 | SAMN04487963_2096 | SAMN04487963_2093 | Pimeloyl-ACP methyl ester carboxylesterase. | Hypothetical protein. | 0.460 |
SFM33222.1 | SFM33181.1 | SAMN04487963_2096 | SAMN04487963_2094 | Pimeloyl-ACP methyl ester carboxylesterase. | Paraquat-inducible protein B; Manually curated. | 0.460 |
SFM33222.1 | SFM33204.1 | SAMN04487963_2096 | SAMN04487963_2095 | Pimeloyl-ACP methyl ester carboxylesterase. | Paraquat-inducible protein A. | 0.460 |
SFM33222.1 | SFM33244.1 | SAMN04487963_2096 | SAMN04487963_2097 | Pimeloyl-ACP methyl ester carboxylesterase. | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | 0.745 |
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