Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM34988.1 | SFM35006.1 | SAMN04487963_2178 | SAMN04487963_2179 | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 0.592 |
SFM34988.1 | SFM56195.1 | SAMN04487963_2178 | SAMN04487963_2972 | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.451 |
SFM35006.1 | SFM34988.1 | SAMN04487963_2179 | SAMN04487963_2178 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Nitroreductase; Belongs to the flavin oxidoreductase frp family. | 0.592 |
SFM35006.1 | SFM35048.1 | SAMN04487963_2179 | SAMN04487963_2181 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Protein phosphatase. | 0.462 |
SFM35006.1 | SFM39380.1 | SAMN04487963_2179 | SAMN04487963_2389 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Phosphoserine phosphatase. | 0.467 |
SFM35006.1 | SFM53927.1 | SAMN04487963_2179 | SAMN04487963_2869 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Amino acid adenylation domain-containing protein. | 0.686 |
SFM35006.1 | SFM56195.1 | SAMN04487963_2179 | SAMN04487963_2972 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.503 |
SFM35006.1 | SFM60770.1 | SAMN04487963_2179 | SAMN04487963_3081 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Octaprenyl-diphosphate synthase; Belongs to the FPP/GGPP synthase family. | 0.465 |
SFM35006.1 | bioB | SAMN04487963_2179 | SAMN04487963_2419 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.525 |
SFM35006.1 | bioF | SAMN04487963_2179 | SAMN04487963_2420 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.423 |
SFM35006.1 | cynS | SAMN04487963_2179 | SAMN04487963_2180 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.490 |
SFM35006.1 | ubiG | SAMN04487963_2179 | SAMN04487963_2597 | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family. | 0.442 |
SFM35048.1 | SFM35006.1 | SAMN04487963_2181 | SAMN04487963_2179 | Protein phosphatase. | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 0.462 |
SFM35048.1 | SFM53927.1 | SAMN04487963_2181 | SAMN04487963_2869 | Protein phosphatase. | Amino acid adenylation domain-containing protein. | 0.416 |
SFM35048.1 | cynS | SAMN04487963_2181 | SAMN04487963_2180 | Protein phosphatase. | Cyanate lyase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family. | 0.903 |
SFM39380.1 | SFM35006.1 | SAMN04487963_2389 | SAMN04487963_2179 | Phosphoserine phosphatase. | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 0.467 |
SFM39380.1 | SFM56195.1 | SAMN04487963_2389 | SAMN04487963_2972 | Phosphoserine phosphatase. | Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.710 |
SFM39380.1 | bioF | SAMN04487963_2389 | SAMN04487963_2420 | Phosphoserine phosphatase. | 8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. | 0.413 |
SFM53927.1 | SFM35006.1 | SAMN04487963_2869 | SAMN04487963_2179 | Amino acid adenylation domain-containing protein. | Ubiquinone/menaquinone biosynthesis C-methylase UbiE. | 0.686 |
SFM53927.1 | SFM35048.1 | SAMN04487963_2869 | SAMN04487963_2181 | Amino acid adenylation domain-containing protein. | Protein phosphatase. | 0.416 |
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