STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM36618.1Cro/C1-type HTH DNA-binding domain-containing protein. (257 aa)    
Predicted Functional Partners:
SFM36632.1
Hypothetical protein.
 
     0.721
SFM36654.1
Phage shock protein A (PspA) family protein.
 
     0.672
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
  0.524
SFM37033.1
Hypothetical protein.
  
     0.493
SFM21627.1
Uncharacterized membrane protein YckC, RDD family.
  
     0.482
SFL91172.1
Intein C-terminal splicing region/intein N-terminal splicing region/RHS repeat-associated core domain-containing protein.
  
     0.457
SFM25519.1
Diadenosine tetraphosphate (Ap4A) hydrolase.
  
  
 0.447
SFM19998.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
  
     0.405
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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