Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM38695.1 | SFM39061.1 | SAMN04487963_2359 | SAMN04487963_2375 | 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway). | Protein of unknown function. | 0.624 |
SFM38897.1 | SFM38939.1 | SAMN04487963_2368 | SAMN04487963_2370 | citronellyl-CoA synthetase. | geranyl-CoA carboxylase alpha subunit. | 0.657 |
SFM38897.1 | SFM38960.1 | SAMN04487963_2368 | SAMN04487963_2371 | citronellyl-CoA synthetase. | isohexenylglutaconyl-CoA hydratase. | 0.655 |
SFM38897.1 | SFM38983.1 | SAMN04487963_2368 | SAMN04487963_2372 | citronellyl-CoA synthetase. | citronellyl-CoA dehydrogenase. | 0.975 |
SFM38897.1 | SFM39015.1 | SAMN04487963_2368 | SAMN04487963_2373 | citronellyl-CoA synthetase. | geranyl-CoA carboxylase beta subunit. | 0.571 |
SFM38897.1 | SFM39038.1 | SAMN04487963_2368 | SAMN04487963_2374 | citronellyl-CoA synthetase. | Citronellol/citronellal dehydrogenase. | 0.948 |
SFM38897.1 | SFM39061.1 | SAMN04487963_2368 | SAMN04487963_2375 | citronellyl-CoA synthetase. | Protein of unknown function. | 0.635 |
SFM38939.1 | SFM38897.1 | SAMN04487963_2370 | SAMN04487963_2368 | geranyl-CoA carboxylase alpha subunit. | citronellyl-CoA synthetase. | 0.657 |
SFM38939.1 | SFM38960.1 | SAMN04487963_2370 | SAMN04487963_2371 | geranyl-CoA carboxylase alpha subunit. | isohexenylglutaconyl-CoA hydratase. | 0.997 |
SFM38939.1 | SFM38983.1 | SAMN04487963_2370 | SAMN04487963_2372 | geranyl-CoA carboxylase alpha subunit. | citronellyl-CoA dehydrogenase. | 0.973 |
SFM38939.1 | SFM39015.1 | SAMN04487963_2370 | SAMN04487963_2373 | geranyl-CoA carboxylase alpha subunit. | geranyl-CoA carboxylase beta subunit. | 0.999 |
SFM38939.1 | SFM39038.1 | SAMN04487963_2370 | SAMN04487963_2374 | geranyl-CoA carboxylase alpha subunit. | Citronellol/citronellal dehydrogenase. | 0.646 |
SFM38939.1 | SFM39061.1 | SAMN04487963_2370 | SAMN04487963_2375 | geranyl-CoA carboxylase alpha subunit. | Protein of unknown function. | 0.886 |
SFM38939.1 | SFM39083.1 | SAMN04487963_2370 | SAMN04487963_2376 | geranyl-CoA carboxylase alpha subunit. | Transcriptional regulator, TetR family. | 0.521 |
SFM38939.1 | SFM70656.1 | SAMN04487963_2370 | SAMN04487963_3445 | geranyl-CoA carboxylase alpha subunit. | 3-methylcrotonyl-CoA carboxylase beta subunit. | 0.997 |
SFM38960.1 | SFM38897.1 | SAMN04487963_2371 | SAMN04487963_2368 | isohexenylglutaconyl-CoA hydratase. | citronellyl-CoA synthetase. | 0.655 |
SFM38960.1 | SFM38939.1 | SAMN04487963_2371 | SAMN04487963_2370 | isohexenylglutaconyl-CoA hydratase. | geranyl-CoA carboxylase alpha subunit. | 0.997 |
SFM38960.1 | SFM38983.1 | SAMN04487963_2371 | SAMN04487963_2372 | isohexenylglutaconyl-CoA hydratase. | citronellyl-CoA dehydrogenase. | 0.873 |
SFM38960.1 | SFM39015.1 | SAMN04487963_2371 | SAMN04487963_2373 | isohexenylglutaconyl-CoA hydratase. | geranyl-CoA carboxylase beta subunit. | 0.981 |
SFM38960.1 | SFM39038.1 | SAMN04487963_2371 | SAMN04487963_2374 | isohexenylglutaconyl-CoA hydratase. | Citronellol/citronellal dehydrogenase. | 0.670 |
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