STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM39061.1Protein of unknown function. (605 aa)    
Predicted Functional Partners:
SFM39015.1
geranyl-CoA carboxylase beta subunit.
 
 
 0.962
SFM38939.1
geranyl-CoA carboxylase alpha subunit.
  
 
 0.886
SFM39038.1
Citronellol/citronellal dehydrogenase.
 
  
 0.883
SFM70656.1
3-methylcrotonyl-CoA carboxylase beta subunit.
  
 
 0.819
SFM38983.1
citronellyl-CoA dehydrogenase.
 
  
 0.743
SFM38960.1
isohexenylglutaconyl-CoA hydratase.
 
 
 0.723
SFM39083.1
Transcriptional regulator, TetR family.
 
   
 0.712
SFM38897.1
citronellyl-CoA synthetase.
 
  
 0.635
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
    
 0.628
SFM38695.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
  
  
 0.624
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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