STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM49384.1Lipoprotein NlpD. (293 aa)    
Predicted Functional Partners:
SFL88766.1
Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.827
SFM10648.1
Tetratricopeptide repeat-containing protein.
  
 
 0.671
SFM39703.1
N-acetylmuramoyl-L-alanine amidase.
 
   
 0.654
SFM52922.1
Putative Zn-dependent protease, contains TPR repeats; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
 
 
   0.650
SFM21100.1
Putative Zn-dependent protease, contains TPR repeats; Manually curated.
 
 
   0.632
SFM48687.1
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
   
   0.580
SFL83361.1
TPR repeat-containing protein.
   
   0.560
SFM03106.1
Tetratricopeptide repeat.
   
   0.560
SFM19062.1
Zn-dependent protease with chaperone function.
   
   0.560
surE-2
5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
 
   
 0.550
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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