STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM53796.1Hypothetical protein. (513 aa)    
Predicted Functional Partners:
SFM55686.1
DNA segregation ATPase FtsK/SpoIIIE, S-DNA-T family.
    
   0.669
SFM55459.1
Pilus assembly protein FimV.
    
 
 0.580
SFM26046.1
Iron complex outermembrane recepter protein.
    
   0.579
SFM78212.1
Outer membrane receptor for ferrienterochelin and colicins.
    
   0.579
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.543
acpP-2
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
   0.543
SFM33345.1
Hypothetical protein.
  
 
  0.498
SFL91995.1
Hypothetical protein.
  
  
  0.493
SFM53818.1
Cupin-like domain-containing protein.
       0.464
SFL94569.1
Protein of unknown function.
   
 0.437
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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