Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFL98257.1 | SFM56441.1 | SAMN04487963_0852 | SAMN04487963_2984 | Transcriptional regulator, IclR family. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.720 |
| SFL98257.1 | SFM56461.1 | SAMN04487963_0852 | SAMN04487963_2985 | Transcriptional regulator, IclR family. | Sensor histidine kinase inhibitor, KipI family. | 0.780 |
| SFL98257.1 | pxpA | SAMN04487963_0852 | SAMN04487963_2986 | Transcriptional regulator, IclR family. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.420 |
| SFM34478.1 | SFM35420.1 | SAMN04487963_2152 | SAMN04487963_2199 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Pyruvate carboxylase subunit B. | 0.622 |
| SFM34478.1 | SFM50325.1 | SAMN04487963_2152 | SAMN04487963_2702 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Oxaloacetate decarboxylase, alpha subunit. | 0.622 |
| SFM34478.1 | SFM56441.1 | SAMN04487963_2152 | SAMN04487963_2984 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.657 |
| SFM34478.1 | SFM56461.1 | SAMN04487963_2152 | SAMN04487963_2985 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Sensor histidine kinase inhibitor, KipI family. | 0.650 |
| SFM34478.1 | SFM61178.1 | SAMN04487963_2152 | SAMN04487963_3100 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | Glutamate synthase (NADPH/NADH) large chain. | 0.979 |
| SFM34478.1 | pxpA | SAMN04487963_2152 | SAMN04487963_2986 | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. | 0.985 |
| SFM35420.1 | SFM34478.1 | SAMN04487963_2199 | SAMN04487963_2152 | Pyruvate carboxylase subunit B. | L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family. | 0.622 |
| SFM35420.1 | SFM38939.1 | SAMN04487963_2199 | SAMN04487963_2370 | Pyruvate carboxylase subunit B. | geranyl-CoA carboxylase alpha subunit. | 0.999 |
| SFM35420.1 | SFM50325.1 | SAMN04487963_2199 | SAMN04487963_2702 | Pyruvate carboxylase subunit B. | Oxaloacetate decarboxylase, alpha subunit. | 0.928 |
| SFM35420.1 | SFM56441.1 | SAMN04487963_2199 | SAMN04487963_2984 | Pyruvate carboxylase subunit B. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.450 |
| SFM35420.1 | SFM56461.1 | SAMN04487963_2199 | SAMN04487963_2985 | Pyruvate carboxylase subunit B. | Sensor histidine kinase inhibitor, KipI family. | 0.509 |
| SFM35420.1 | SFM61178.1 | SAMN04487963_2199 | SAMN04487963_3100 | Pyruvate carboxylase subunit B. | Glutamate synthase (NADPH/NADH) large chain. | 0.980 |
| SFM38939.1 | SFM35420.1 | SAMN04487963_2370 | SAMN04487963_2199 | geranyl-CoA carboxylase alpha subunit. | Pyruvate carboxylase subunit B. | 0.999 |
| SFM38939.1 | SFM50325.1 | SAMN04487963_2370 | SAMN04487963_2702 | geranyl-CoA carboxylase alpha subunit. | Oxaloacetate decarboxylase, alpha subunit. | 0.999 |
| SFM38939.1 | SFM56441.1 | SAMN04487963_2370 | SAMN04487963_2984 | geranyl-CoA carboxylase alpha subunit. | Biotin-dependent carboxylase uncharacterized domain-containing protein. | 0.528 |
| SFM38939.1 | SFM56461.1 | SAMN04487963_2370 | SAMN04487963_2985 | geranyl-CoA carboxylase alpha subunit. | Sensor histidine kinase inhibitor, KipI family. | 0.526 |
| SFM38939.1 | SFM61178.1 | SAMN04487963_2370 | SAMN04487963_3100 | geranyl-CoA carboxylase alpha subunit. | Glutamate synthase (NADPH/NADH) large chain. | 0.883 |
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