STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM56941.1Uncharacterized conserved protein. (408 aa)    
Predicted Functional Partners:
SFM56923.1
Hypothetical protein.
       0.732
SFM34928.1
Membrane dipeptidase (Peptidase family M19).
  
     0.603
SFM68670.1
Fatty acid desaturase.
  
     0.602
SFL84020.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
     0.575
SFM33244.1
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD.
  
     0.575
SFL98558.1
Membrane dipeptidase (Peptidase family M19).
  
     0.549
SFM60850.1
Acyltransferase, WS/DGAT/MGAT.
  
     0.528
SFM00555.1
Diacylglycerol O-acyltransferase.
  
     0.509
SFM68600.1
Diacylglycerol O-acyltransferase.
  
     0.488
SFM00570.1
Acyltransferase, WS/DGAT/MGAT.
  
     0.484
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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