Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL92902.1 | SFM64352.1 | SAMN04487963_0588 | SAMN04487963_3243 | Hypothetical protein. | Protein of unknown function. | 0.840 |
SFL92902.1 | SFM64402.1 | SAMN04487963_0588 | SAMN04487963_3245 | Hypothetical protein. | Putative ABC transport system ATP-binding protein. | 0.769 |
SFL92902.1 | SFM64430.1 | SAMN04487963_0588 | SAMN04487963_3246 | Hypothetical protein. | Putative ABC transport system permease protein. | 0.788 |
SFM50721.1 | SFM64402.1 | SAMN04487963_2719 | SAMN04487963_3245 | Putative ABC transport system permease protein. | Putative ABC transport system ATP-binding protein. | 0.807 |
SFM50721.1 | lolA | SAMN04487963_2719 | SAMN04487963_2947 | Putative ABC transport system permease protein. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.585 |
SFM51985.1 | SFM64402.1 | SAMN04487963_2778 | SAMN04487963_3245 | Lipoprotein-releasing system permease protein. | Putative ABC transport system ATP-binding protein. | 0.913 |
SFM51985.1 | lolA | SAMN04487963_2778 | SAMN04487963_2947 | Lipoprotein-releasing system permease protein. | Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane). | 0.977 |
SFM64352.1 | SFL92902.1 | SAMN04487963_3243 | SAMN04487963_0588 | Protein of unknown function. | Hypothetical protein. | 0.840 |
SFM64352.1 | SFM64379.1 | SAMN04487963_3243 | SAMN04487963_3244 | Protein of unknown function. | Hypothetical protein. | 0.842 |
SFM64352.1 | SFM64402.1 | SAMN04487963_3243 | SAMN04487963_3245 | Protein of unknown function. | Putative ABC transport system ATP-binding protein. | 0.746 |
SFM64352.1 | SFM64430.1 | SAMN04487963_3243 | SAMN04487963_3246 | Protein of unknown function. | Putative ABC transport system permease protein. | 0.796 |
SFM64379.1 | SFM64352.1 | SAMN04487963_3244 | SAMN04487963_3243 | Hypothetical protein. | Protein of unknown function. | 0.842 |
SFM64379.1 | SFM64402.1 | SAMN04487963_3244 | SAMN04487963_3245 | Hypothetical protein. | Putative ABC transport system ATP-binding protein. | 0.904 |
SFM64379.1 | SFM64430.1 | SAMN04487963_3244 | SAMN04487963_3246 | Hypothetical protein. | Putative ABC transport system permease protein. | 0.909 |
SFM64379.1 | SFM64449.1 | SAMN04487963_3244 | SAMN04487963_3247 | Hypothetical protein. | Cell division protein ZapB. | 0.418 |
SFM64379.1 | SFM64467.1 | SAMN04487963_3244 | SAMN04487963_3248 | Hypothetical protein. | Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division. | 0.418 |
SFM64402.1 | SFL92902.1 | SAMN04487963_3245 | SAMN04487963_0588 | Putative ABC transport system ATP-binding protein. | Hypothetical protein. | 0.769 |
SFM64402.1 | SFM50721.1 | SAMN04487963_3245 | SAMN04487963_2719 | Putative ABC transport system ATP-binding protein. | Putative ABC transport system permease protein. | 0.807 |
SFM64402.1 | SFM51985.1 | SAMN04487963_3245 | SAMN04487963_2778 | Putative ABC transport system ATP-binding protein. | Lipoprotein-releasing system permease protein. | 0.913 |
SFM64402.1 | SFM64352.1 | SAMN04487963_3245 | SAMN04487963_3243 | Putative ABC transport system ATP-binding protein. | Protein of unknown function. | 0.746 |
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