STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFM71476.1Hypothetical protein. (131 aa)    
Predicted Functional Partners:
SFM71464.1
Sel1 repeat-containing protein.
       0.773
SFM71429.1
Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP.
       0.682
SFM71446.1
Signal transduction histidine kinase.
       0.682
SFM71495.1
Protein of unknown function.
       0.498
SFM71509.1
Hypothetical protein.
       0.498
SFM71525.1
Hypothetical protein.
       0.498
SFM71541.1
Uncharacterized protein YPO0702.
       0.453
SFM71412.1
Hypothetical protein.
       0.432
Your Current Organism:
Marinobacter zhejiangensis
NCBI taxonomy Id: 488535
Other names: CGMCC 1.7061, JCM 15156, M. zhejiangensis, Marinobacter sp. CN74, Marinobacter zhejiangensis Huo et al. 2008, strain CN74
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