Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM71412.1 | SFM71429.1 | SAMN04487963_3483 | SAMN04487963_3484 | Hypothetical protein. | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | 0.481 |
SFM71412.1 | SFM71446.1 | SAMN04487963_3483 | SAMN04487963_3485 | Hypothetical protein. | Signal transduction histidine kinase. | 0.481 |
SFM71412.1 | SFM71464.1 | SAMN04487963_3483 | SAMN04487963_3486 | Hypothetical protein. | Sel1 repeat-containing protein. | 0.432 |
SFM71412.1 | SFM71476.1 | SAMN04487963_3483 | SAMN04487963_3487 | Hypothetical protein. | Hypothetical protein. | 0.432 |
SFM71429.1 | SFM71412.1 | SAMN04487963_3484 | SAMN04487963_3483 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Hypothetical protein. | 0.481 |
SFM71429.1 | SFM71446.1 | SAMN04487963_3484 | SAMN04487963_3485 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Signal transduction histidine kinase. | 0.964 |
SFM71429.1 | SFM71464.1 | SAMN04487963_3484 | SAMN04487963_3486 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Sel1 repeat-containing protein. | 0.685 |
SFM71429.1 | SFM71476.1 | SAMN04487963_3484 | SAMN04487963_3487 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Hypothetical protein. | 0.682 |
SFM71429.1 | SFM71495.1 | SAMN04487963_3484 | SAMN04487963_3488 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Protein of unknown function. | 0.446 |
SFM71429.1 | SFM71509.1 | SAMN04487963_3484 | SAMN04487963_3489 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Hypothetical protein. | 0.446 |
SFM71429.1 | SFM71525.1 | SAMN04487963_3484 | SAMN04487963_3490 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Hypothetical protein. | 0.446 |
SFM71429.1 | SFM71541.1 | SAMN04487963_3484 | SAMN04487963_3491 | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | Uncharacterized protein YPO0702. | 0.407 |
SFM71446.1 | SFM71412.1 | SAMN04487963_3485 | SAMN04487963_3483 | Signal transduction histidine kinase. | Hypothetical protein. | 0.481 |
SFM71446.1 | SFM71429.1 | SAMN04487963_3485 | SAMN04487963_3484 | Signal transduction histidine kinase. | Two-component system, OmpR family, alkaline phosphatase synthesis response regulator PhoP. | 0.964 |
SFM71446.1 | SFM71464.1 | SAMN04487963_3485 | SAMN04487963_3486 | Signal transduction histidine kinase. | Sel1 repeat-containing protein. | 0.682 |
SFM71446.1 | SFM71476.1 | SAMN04487963_3485 | SAMN04487963_3487 | Signal transduction histidine kinase. | Hypothetical protein. | 0.682 |
SFM71446.1 | SFM71495.1 | SAMN04487963_3485 | SAMN04487963_3488 | Signal transduction histidine kinase. | Protein of unknown function. | 0.446 |
SFM71446.1 | SFM71509.1 | SAMN04487963_3485 | SAMN04487963_3489 | Signal transduction histidine kinase. | Hypothetical protein. | 0.446 |
SFM71446.1 | SFM71525.1 | SAMN04487963_3485 | SAMN04487963_3490 | Signal transduction histidine kinase. | Hypothetical protein. | 0.446 |
SFM71446.1 | SFM71541.1 | SAMN04487963_3485 | SAMN04487963_3491 | Signal transduction histidine kinase. | Uncharacterized protein YPO0702. | 0.407 |
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