Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFL97775.1 | SFL97905.1 | SAMN04487963_0827 | SAMN04487963_0834 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | fatty-acyl-CoA synthase. | 0.732 |
SFL97775.1 | SFM00453.1 | SAMN04487963_0827 | SAMN04487963_0968 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Long-chain acyl-CoA synthetase. | 0.583 |
SFL97775.1 | SFM32768.1 | SAMN04487963_0827 | SAMN04487963_2070 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | fatty-acyl-CoA synthase. | 0.593 |
SFL97775.1 | SFM74704.1 | SAMN04487963_0827 | SAMN04487963_3569 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | Undecaprenyl-diphosphatase. | 0.715 |
SFL97775.1 | rplF | SAMN04487963_0827 | SAMN04487963_3267 | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.859 |
SFL97905.1 | SFL97775.1 | SAMN04487963_0834 | SAMN04487963_0827 | fatty-acyl-CoA synthase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.732 |
SFL97905.1 | SFM74704.1 | SAMN04487963_0834 | SAMN04487963_3569 | fatty-acyl-CoA synthase. | Undecaprenyl-diphosphatase. | 0.715 |
SFL97905.1 | rplF | SAMN04487963_0834 | SAMN04487963_3267 | fatty-acyl-CoA synthase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.859 |
SFM00453.1 | SFL97775.1 | SAMN04487963_0968 | SAMN04487963_0827 | Long-chain acyl-CoA synthetase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.583 |
SFM00453.1 | SFM74704.1 | SAMN04487963_0968 | SAMN04487963_3569 | Long-chain acyl-CoA synthetase. | Undecaprenyl-diphosphatase. | 0.715 |
SFM00453.1 | rplF | SAMN04487963_0968 | SAMN04487963_3267 | Long-chain acyl-CoA synthetase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.859 |
SFM14227.1 | SFM74704.1 | SAMN04487963_1356 | SAMN04487963_3569 | fatty-acyl-CoA synthase. | Undecaprenyl-diphosphatase. | 0.715 |
SFM14227.1 | rplF | SAMN04487963_1356 | SAMN04487963_3267 | fatty-acyl-CoA synthase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.876 |
SFM25519.1 | SFM74704.1 | SAMN04487963_1940 | SAMN04487963_3569 | Diadenosine tetraphosphate (Ap4A) hydrolase. | Undecaprenyl-diphosphatase. | 0.758 |
SFM25519.1 | rplF | SAMN04487963_1940 | SAMN04487963_3267 | Diadenosine tetraphosphate (Ap4A) hydrolase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.586 |
SFM32768.1 | SFL97775.1 | SAMN04487963_2070 | SAMN04487963_0827 | fatty-acyl-CoA synthase. | Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II. | 0.593 |
SFM32768.1 | SFM74704.1 | SAMN04487963_2070 | SAMN04487963_3569 | fatty-acyl-CoA synthase. | Undecaprenyl-diphosphatase. | 0.715 |
SFM32768.1 | rplF | SAMN04487963_2070 | SAMN04487963_3267 | fatty-acyl-CoA synthase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.859 |
SFM37938.1 | SFM74704.1 | SAMN04487963_2322 | SAMN04487963_3569 | fatty-acyl-CoA synthase. | Undecaprenyl-diphosphatase. | 0.715 |
SFM37938.1 | rplF | SAMN04487963_2322 | SAMN04487963_3267 | fatty-acyl-CoA synthase. | LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.859 |
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