Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFM77305.1 | SFM77340.1 | SAMN04487963_3642 | SAMN04487963_3643 | 4-oxalocrotonate decarboxylase; Partial gene; manually curated. | 4-oxalocrotonate tautomerase. | 0.967 |
SFM77305.1 | SFM77361.1 | SAMN04487963_3642 | SAMN04487963_3644 | 4-oxalocrotonate decarboxylase; Partial gene; manually curated. | Hypothetical protein. | 0.597 |
SFM77305.1 | SFM77377.1 | SAMN04487963_3642 | SAMN04487963_3645 | 4-oxalocrotonate decarboxylase; Partial gene; manually curated. | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.531 |
SFM77340.1 | SFM77305.1 | SAMN04487963_3643 | SAMN04487963_3642 | 4-oxalocrotonate tautomerase. | 4-oxalocrotonate decarboxylase; Partial gene; manually curated. | 0.967 |
SFM77340.1 | SFM77361.1 | SAMN04487963_3643 | SAMN04487963_3644 | 4-oxalocrotonate tautomerase. | Hypothetical protein. | 0.629 |
SFM77340.1 | SFM77377.1 | SAMN04487963_3643 | SAMN04487963_3645 | 4-oxalocrotonate tautomerase. | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.538 |
SFM77361.1 | SFM77305.1 | SAMN04487963_3644 | SAMN04487963_3642 | Hypothetical protein. | 4-oxalocrotonate decarboxylase; Partial gene; manually curated. | 0.597 |
SFM77361.1 | SFM77340.1 | SAMN04487963_3644 | SAMN04487963_3643 | Hypothetical protein. | 4-oxalocrotonate tautomerase. | 0.629 |
SFM77361.1 | SFM77377.1 | SAMN04487963_3644 | SAMN04487963_3645 | Hypothetical protein. | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 0.682 |
SFM77377.1 | SFM77305.1 | SAMN04487963_3645 | SAMN04487963_3642 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 4-oxalocrotonate decarboxylase; Partial gene; manually curated. | 0.531 |
SFM77377.1 | SFM77340.1 | SAMN04487963_3645 | SAMN04487963_3643 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | 4-oxalocrotonate tautomerase. | 0.538 |
SFM77377.1 | SFM77361.1 | SAMN04487963_3645 | SAMN04487963_3644 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Hypothetical protein. | 0.682 |