STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE38337.1CDP-alcohol phosphatidyltransferase. (165 aa)    
Predicted Functional Partners:
ADE39152.1
Binding-protein-dependent transport systems inner membrane component.
 
     0.792
ADE39153.1
Hypothetical protein.
 
     0.792
ADE39154.1
ABC transporter related protein.
 
     0.714
ADE40171.1
Hypothetical protein.
  
    0.706
ADE38338.1
Carbon-monoxide dehydrogenase (acceptor).
       0.675
ADE39566.1
SNARE associated Golgi protein-like protein.
 
     0.663
ADE38336.1
Phosphatidylserine decarboxylase related protein.
   
 
 0.646
msrB
methionine-R-sulfoxide reductase; Belongs to the MsrB Met sulfoxide reductase family.
     
 0.628
ADE38907.1
Molybdopterin binding domain protein.
  
  
 0.477
ADE38335.1
Peptidoglycan-binding LysM.
     
 0.455
Your Current Organism:
Puniceispirillum marinum
NCBI taxonomy Id: 488538
Other names: C. Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum str. IMCC1322, Candidatus Puniceispirillum marinum strain IMCC1322, alpha proteobacterium IMCC1322
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.