STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE38436.1Putative long-chain-fatty-acid--CoA ligase (Long-chain acyl-CoA synthetase). (591 aa)    
Predicted Functional Partners:
ADE39120.1
acyl-CoA dehydrogenase.
 
 0.684
rplE
Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.
    
 
 0.672
ADE39165.1
acyl-CoA dehydrogenase domain protein.
  
 0.644
ADE39423.1
acyl-CoA dehydrogenase.
  
 0.644
ADE40224.1
acyl-CoA dehydrogenase-like protein.
  
 0.644
ADE38435.1
Protein of unknown function DUF6 transmembrane.
       0.620
gmk
Guanylate kinase; Essential for recycling GMP and indirectly, cGMP.
    
  0.611
ADE38799.1
Putative fatty acid oxidation complex alpha subunit.
  
 
 0.608
ADE39422.1
acetoacetyl-CoA reductase.
  
 
 0.608
rplR
Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.
    
 
 0.592
Your Current Organism:
Puniceispirillum marinum
NCBI taxonomy Id: 488538
Other names: C. Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum str. IMCC1322, Candidatus Puniceispirillum marinum strain IMCC1322, alpha proteobacterium IMCC1322
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.