Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADE38276.1 | ADE39170.1 | SAR116_0033 | SAR116_0927 | Hypothetical protein. | Xylose isomerase domain protein TIM barrel. | 0.526 |
ADE38510.1 | ADE38516.1 | SAR116_0267 | SAR116_0273 | Hypothetical protein. | Myo-inositol catabolism IolC protein. | 0.867 |
ADE38510.1 | ADE38517.1 | SAR116_0267 | SAR116_0274 | Hypothetical protein. | Acetolactate synthase, iolD; Belongs to the TPP enzyme family. | 0.907 |
ADE38510.1 | ADE39170.1 | SAR116_0267 | SAR116_0927 | Hypothetical protein. | Xylose isomerase domain protein TIM barrel. | 0.519 |
ADE38510.1 | ADE40234.1 | SAR116_0267 | SAR116_1991 | Hypothetical protein. | NAD binding oxidoreductase. | 0.658 |
ADE38516.1 | ADE38510.1 | SAR116_0273 | SAR116_0267 | Myo-inositol catabolism IolC protein. | Hypothetical protein. | 0.867 |
ADE38516.1 | ADE38517.1 | SAR116_0273 | SAR116_0274 | Myo-inositol catabolism IolC protein. | Acetolactate synthase, iolD; Belongs to the TPP enzyme family. | 0.991 |
ADE38516.1 | ADE39167.1 | SAR116_0273 | SAR116_0924 | Myo-inositol catabolism IolC protein. | Putative oxidoreductase. | 0.405 |
ADE38516.1 | ADE39170.1 | SAR116_0273 | SAR116_0927 | Myo-inositol catabolism IolC protein. | Xylose isomerase domain protein TIM barrel. | 0.592 |
ADE38516.1 | ADE40234.1 | SAR116_0273 | SAR116_1991 | Myo-inositol catabolism IolC protein. | NAD binding oxidoreductase. | 0.405 |
ADE38517.1 | ADE38510.1 | SAR116_0274 | SAR116_0267 | Acetolactate synthase, iolD; Belongs to the TPP enzyme family. | Hypothetical protein. | 0.907 |
ADE38517.1 | ADE38516.1 | SAR116_0274 | SAR116_0273 | Acetolactate synthase, iolD; Belongs to the TPP enzyme family. | Myo-inositol catabolism IolC protein. | 0.991 |
ADE38517.1 | ADE39167.1 | SAR116_0274 | SAR116_0924 | Acetolactate synthase, iolD; Belongs to the TPP enzyme family. | Putative oxidoreductase. | 0.621 |
ADE38517.1 | ADE39170.1 | SAR116_0274 | SAR116_0927 | Acetolactate synthase, iolD; Belongs to the TPP enzyme family. | Xylose isomerase domain protein TIM barrel. | 0.691 |
ADE38517.1 | ADE40234.1 | SAR116_0274 | SAR116_1991 | Acetolactate synthase, iolD; Belongs to the TPP enzyme family. | NAD binding oxidoreductase. | 0.676 |
ADE39163.1 | ADE39166.1 | SAR116_0920 | SAR116_0923 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Coenzyme A transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family. | 0.636 |
ADE39163.1 | ADE39167.1 | SAR116_0920 | SAR116_0924 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Putative oxidoreductase. | 0.636 |
ADE39163.1 | ADE39168.1 | SAR116_0920 | SAR116_0925 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | MaoC-like dehydratase. | 0.524 |
ADE39163.1 | ADE39169.1 | SAR116_0920 | SAR116_0926 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Short-chain dehydrogenase/reductase SDR. | 0.480 |
ADE39163.1 | ADE39170.1 | SAR116_0920 | SAR116_0927 | 2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. | Xylose isomerase domain protein TIM barrel. | 0.504 |
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