STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE39170.1Xylose isomerase domain protein TIM barrel. (279 aa)    
Predicted Functional Partners:
ADE39169.1
Short-chain dehydrogenase/reductase SDR.
  
    0.774
ADE39167.1
Putative oxidoreductase.
  
  
 0.744
ADE39168.1
MaoC-like dehydratase.
       0.701
ADE38517.1
Acetolactate synthase, iolD; Belongs to the TPP enzyme family.
  
  
 0.691
ADE39166.1
Coenzyme A transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.
       0.606
ADE38516.1
Myo-inositol catabolism IolC protein.
  
  
 0.592
ADE38276.1
Hypothetical protein.
  
     0.526
ADE38510.1
Hypothetical protein.
 
  
 0.519
ADE39163.1
2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.
  
    0.504
ADE40234.1
NAD binding oxidoreductase.
 
  
 0.495
Your Current Organism:
Puniceispirillum marinum
NCBI taxonomy Id: 488538
Other names: C. Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum str. IMCC1322, Candidatus Puniceispirillum marinum strain IMCC1322, alpha proteobacterium IMCC1322
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