STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE39401.1Putative sensor histidine kinase protein. (396 aa)    
Predicted Functional Partners:
ADE39399.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.463
psd
Phosphatidylserine decarboxylase-related:Phosphatidylserine decarboxylase-related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
       0.463
ADE39402.1
Carboxymuconolactone decarboxylase family protein.
       0.401
Your Current Organism:
Puniceispirillum marinum
NCBI taxonomy Id: 488538
Other names: C. Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum str. IMCC1322, Candidatus Puniceispirillum marinum strain IMCC1322, alpha proteobacterium IMCC1322
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