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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE39906.1Phage SPO1 DNA polymerase-related protein. (317 aa)    
Predicted Functional Partners:
ADE38783.1
Uracil-DNA glycosylase superfamily.
  
  
 0.954
ADE39907.1
Soluble lytic murein transglycosylase and related regulatory protein.
   
   0.776
ADE39908.1
Molybdopterin binding domain protein; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.
       0.597
rnhB
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.
     
 0.595
ADE38643.1
Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.
   
   0.579
ADE39835.1
Putative protease.
  
    0.448
Your Current Organism:
Puniceispirillum marinum
NCBI taxonomy Id: 488538
Other names: C. Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum str. IMCC1322, Candidatus Puniceispirillum marinum strain IMCC1322, alpha proteobacterium IMCC1322
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