STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADE39983.1Protein of unknown function DUF453. (362 aa)    
Predicted Functional Partners:
ADE39980.1
Uncharacterized protein UPF0065.
    0.932
ADE39981.1
Protein of unknown function DUF112, transmembrane.
 
     0.931
ADE39984.1
D-isomer specific 2-hydroxyacid dehydrogenase.
 
     0.914
ADE39978.1
Integral membrane sensor signal transduction histidine kinase.
 
     0.828
ADE39982.1
Probable 3-isopropylmalate dehydrogenase oxidoreductase protein.
       0.775
ADE39318.1
Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate.
  
  
 0.727
ADE39987.1
Hypothetical protein.
 
    0.591
ADE40404.1
Hypothetical protein.
 
   
 0.551
ADE39979.1
Response regulator protein.
 
     0.499
ADE38747.1
Citrate synthase I; Belongs to the citrate synthase family.
  
  
 0.462
Your Current Organism:
Puniceispirillum marinum
NCBI taxonomy Id: 488538
Other names: C. Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum IMCC1322, Candidatus Puniceispirillum marinum str. IMCC1322, Candidatus Puniceispirillum marinum strain IMCC1322, alpha proteobacterium IMCC1322
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.