Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADE38747.1 | ADE38799.1 | SAR116_0504 | SAR116_0556 | Citrate synthase I; Belongs to the citrate synthase family. | Putative fatty acid oxidation complex alpha subunit. | 0.772 |
ADE38747.1 | ADE38928.1 | SAR116_0504 | SAR116_0685 | Citrate synthase I; Belongs to the citrate synthase family. | Acetyl-coenzyme A synthetase. | 0.712 |
ADE38747.1 | ADE39168.1 | SAR116_0504 | SAR116_0925 | Citrate synthase I; Belongs to the citrate synthase family. | MaoC-like dehydratase. | 0.439 |
ADE38747.1 | ADE39318.1 | SAR116_0504 | SAR116_1075 | Citrate synthase I; Belongs to the citrate synthase family. | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.995 |
ADE38747.1 | ADE39422.1 | SAR116_0504 | SAR116_1179 | Citrate synthase I; Belongs to the citrate synthase family. | acetoacetyl-CoA reductase. | 0.772 |
ADE38747.1 | ADE39843.1 | SAR116_0504 | SAR116_1600 | Citrate synthase I; Belongs to the citrate synthase family. | Malate dehydrogenase. | 0.937 |
ADE38747.1 | ADE40619.1 | SAR116_0504 | SAR116_2376 | Citrate synthase I; Belongs to the citrate synthase family. | Hypothetical protein. | 0.910 |
ADE38747.1 | glcB | SAR116_0504 | SAR116_1669 | Citrate synthase I; Belongs to the citrate synthase family. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.965 |
ADE38747.1 | mdh | SAR116_0504 | SAR116_1831 | Citrate synthase I; Belongs to the citrate synthase family. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.994 |
ADE38799.1 | ADE38747.1 | SAR116_0556 | SAR116_0504 | Putative fatty acid oxidation complex alpha subunit. | Citrate synthase I; Belongs to the citrate synthase family. | 0.772 |
ADE38799.1 | ADE38928.1 | SAR116_0556 | SAR116_0685 | Putative fatty acid oxidation complex alpha subunit. | Acetyl-coenzyme A synthetase. | 0.979 |
ADE38799.1 | ADE39168.1 | SAR116_0556 | SAR116_0925 | Putative fatty acid oxidation complex alpha subunit. | MaoC-like dehydratase. | 0.976 |
ADE38799.1 | ADE39318.1 | SAR116_0556 | SAR116_1075 | Putative fatty acid oxidation complex alpha subunit. | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.794 |
ADE38799.1 | ADE39422.1 | SAR116_0556 | SAR116_1179 | Putative fatty acid oxidation complex alpha subunit. | acetoacetyl-CoA reductase. | 0.783 |
ADE38799.1 | ADE39843.1 | SAR116_0556 | SAR116_1600 | Putative fatty acid oxidation complex alpha subunit. | Malate dehydrogenase. | 0.610 |
ADE38799.1 | ADE40619.1 | SAR116_0556 | SAR116_2376 | Putative fatty acid oxidation complex alpha subunit. | Hypothetical protein. | 0.572 |
ADE38799.1 | glcB | SAR116_0556 | SAR116_1669 | Putative fatty acid oxidation complex alpha subunit. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.773 |
ADE38799.1 | mdh | SAR116_0556 | SAR116_1831 | Putative fatty acid oxidation complex alpha subunit. | Malate dehydrogenase, NAD-dependent; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family. | 0.495 |
ADE38928.1 | ADE38747.1 | SAR116_0685 | SAR116_0504 | Acetyl-coenzyme A synthetase. | Citrate synthase I; Belongs to the citrate synthase family. | 0.712 |
ADE38928.1 | ADE38799.1 | SAR116_0685 | SAR116_0556 | Acetyl-coenzyme A synthetase. | Putative fatty acid oxidation complex alpha subunit. | 0.979 |
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