STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS49319.1Precorrin methylase. (121 aa)    
Predicted Functional Partners:
KHS49318.1
precorrin-6Y C5,15-methyltransferase.
 
  
 0.982
KHS49320.1
Precorrin-4 C11-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.979
KHS49315.1
Precorrin-2 C20-methyltransferase; Belongs to the precorrin methyltransferase family.
 
 
 0.978
KHS49316.1
Precorrin-3 methyltransferase.
 
 
 0.966
KHS49313.1
precorrin-3B synthase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
 
  
  0.958
KHS49314.1
precorrin-8X methylmutase.
 
 
 0.947
cobN_1
Cobaltochelatase subunit CobN.
 
   
 0.930
KHS49540.1
precorrin-6Y C5,15-methyltransferase.
 
  
 0.925
KHS49323.1
Precorrin 6A synthase; Catalyzes the methylation of C-1 in precorrin-5 and the subsequent extrusion of acetic acid from the resulting intermediate to form cobalt-precorrin-6A.
 
 
 0.924
KHS49545.1
Precorrin 6A synthase.
 
 
 0.924
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.