STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS49068.1Phosphoribosyltransferase. (263 aa)    
Predicted Functional Partners:
KHS48311.1
DNA processing protein DprA.
 
 
 0.915
KHS46584.1
DNA repair protein RadC; Belongs to the UPF0758 family.
 
    0.873
KHS48773.1
Integral membrane sensor hybrid histidine kinase; Overlaps another CDS with the same product name.
  
  
 0.834
KHS46978.1
Mg chelatase-like protein.
 
  
 0.817
KHS48983.1
ComEC/Rec2-like protein.
 
  
 0.810
KHS44313.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
   
   0.806
KHS47035.1
Cyclohexadienyl dehydrogenase.
   
  
 0.785
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.766
KHS49069.1
Putative methyltransferase.
  
    0.707
KHS46089.1
Periplasmic sensor diguanylate cyclase/phosphodiesterase.
  
  
 0.629
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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