STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS49099.1Hypothetical protein. (199 aa)    
Predicted Functional Partners:
KHS49098.1
Hypothetical protein.
 
     0.958
KHS49100.1
Hypothetical protein.
 
     0.871
KHS49101.1
Aminoglycoside phosphotransferase.
 
     0.850
KHS44112.1
NUDIX hydrolase.
  
     0.646
KHS49140.1
Hypothetical protein.
  
     0.600
KHS42630.1
Thioesterase superfamily protein.
  
     0.568
KHS46912.1
Nuclease.
  
     0.541
KHS49102.1
Hypothetical protein.
       0.529
KHS48400.1
Levansucrase; Belongs to the glycosyl hydrolase 68 family.
  
     0.517
KHS48050.1
Sel1 repeat-containing protein.
  
     0.512
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.