STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS49140.1Hypothetical protein. (194 aa)    
Predicted Functional Partners:
KHS48321.1
Oxidoreductase.
  
  
 0.922
pucM
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
   
    0.755
KHS49098.1
Hypothetical protein.
  
     0.650
KHS42277.1
TetR family transcriptional regulator.
  
     0.605
KHS49099.1
Hypothetical protein.
  
     0.600
KHS48694.1
Glutathione S-transferase-like protein; Overlaps another CDS with the same product name.
  
     0.563
KHS43967.1
Hypothetical protein.
  
     0.557
KHS45554.1
Glutathione S-transferase-like protein.
  
     0.555
KHS48308.1
Beta-lactamase-like protein.
  
     0.553
KHS48478.1
Adhesin HecA family protein.
  
     0.549
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: low (26%) [HD]