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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Assay-based Predictions
experimentally determined
co-expression
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[Homology]
Score
KHS48669.1NADH oxidoreductase. (369 aa)    
Predicted Functional Partners:
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
     
 0.847
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
     
 0.838
KHS46809.1
Pyruvate flavodoxin/ferredoxin oxidoreductase-like protein.
     
 0.722
KHS45223.1
Phosphate butyryltransferase.
  
 0.615
KHS48696.1
Pyrrolo-quinoline quinone.
  
  
  0.614
KHS48306.1
Nitroreductase.
  
     0.614
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.
       0.613
KHS48688.1
Pyrrolo-quinoline quinone.
  
  
  0.597
KHS42630.1
Thioesterase superfamily protein.
  
 
   0.596
KHS42657.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.577
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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