STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS47021.1Glyoxalase/bleomycin resistance protein/dioxygenase. (304 aa)    
Predicted Functional Partners:
KHS47020.1
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein; Belongs to the UPF0255 family.
 
     0.951
KHS47022.1
FAD-binding monooxygenase.
 
  
  0.937
KHS47018.1
Cyclase.
 
     0.834
KHS47023.1
Major facilitator transporter.
 
     0.810
KHS47019.1
Hypothetical protein.
       0.793
KHS43841.1
FAD-binding monooxygenase.
 
  
  0.782
KHS43849.1
Putative oxidoreductase.
 
  
  0.748
KHS43838.1
Dipeptidyl aminopeptidase/acylaminoacyl-peptidase-like protein.
 
     0.719
KHS45053.1
Hypothetical protein.
  
     0.712
KHS45052.1
Xylose isomerase-like TIM barrel domain-containing protein.
  
     0.711
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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