STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS46749.1Twin-arginine translocation pathway signal protein. (720 aa)    
Predicted Functional Partners:
KHS46750.1
(2Fe-2S)-binding protein.
 0.993
KHS47664.1
(2Fe-2S)-binding protein.
 0.963
KHS42224.1
(2Fe-2S)-binding protein.
 0.958
KHS41628.1
(2Fe-2S)-binding protein.
 0.958
xdhC
Xanthine dehydrogenase accessory factor.
 
 
 0.957
KHS46747.1
MobA-like protein.
 
  
 0.945
KHS46929.1
Twin-arginine translocation pathway signal protein.
 
0.860
KHS46751.1
TetR family transcriptional regulator.
       0.501
KHS48773.1
Integral membrane sensor hybrid histidine kinase; Overlaps another CDS with the same product name.
   
 
  0.497
KHS46721.1
Cytochrome c, class I; Overlaps another CDS with the same product name.
 
 
 0.483
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: low (28%) [HD]