Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KHS46768.1RND efflux system outer membrane lipoprotein NodT. (485 aa)    
Predicted Functional Partners:
KHS46770.1
Secretion protein HlyD.
 
  0.914
KHS44392.1
Hydrophobe/amphiphile efflux-1 protein.
 0.886
KHS46769.1
EmrB/QacA family drug resistance transporter; Belongs to the major facilitator superfamily.
 
   0.848
KHS44393.1
Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.848
KHS43770.1
Efflux pump membrane protein.
 
  0.758
KHS41581.1
Multidrug resistance efflux pump.
 
  0.735
cusB
Copper efflux system membrane protein CusB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.717
KHS46099.1
Multidrug resistance protein A.
 
  0.668
KHS42512.1
Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
 0.614
KHS46766.1
TetR family transcriptional regulator.
 
     0.608
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.