Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
KHS46499.1Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (267 aa)    
Predicted Functional Partners:
KHS46066.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.730
KHS46665.1
Putative oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.698
KHS46500.1
HhH-GPD.
       0.688
KHS45627.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.678
KHS48208.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.660
KHS46816.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.636
KHS48133.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.606
KHS43792.1
Short-chain dehydrogenase/reductase SDR; Overlaps another CDS with the same product name.
  
  
  0.564
KHS45079.1
Short-chain dehydrogenase/reductase SDR.
  
  
  0.516
KHS46501.1
Ferredoxin.
       0.460
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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