STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS46599.1Major facilitator transporter. (441 aa)    
Predicted Functional Partners:
KHS46600.1
Pseudouridine synthase; Belongs to the pseudouridine synthase RsuA family.
       0.595
KHS46601.1
N6-adenine-specific methylase.
       0.593
KHS46527.1
beta-N-acetylhexosaminidase.
 
   
 0.566
KHS48467.1
Aminoglycoside phosphotransferase.
  
   
 0.503
KHS43249.1
VacJ-like lipoprotein.
  
     0.497
KHS44067.1
Para-aminobenzoate synthase, component I.
   
 
 0.415
KHS48098.1
PpiC-type peptidyl-prolyl cis-trans isomerase.
  
     0.412
KHS48289.1
Lytic transglycosylase catalytic subunit.
  
   
 0.410
KHS48529.1
Lytic murein transglycosylase.
  
   
 0.400
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
Server load: low (26%) [HD]