STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS45815.1Amidohydrolase 3. (582 aa)    
Predicted Functional Partners:
KHS49100.1
Hypothetical protein.
  
     0.569
KHS49205.1
Phenylacetic acid degradation-like protein.
  
     0.563
KHS45816.1
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
       0.512
KHS48342.1
Hypothetical protein.
  
     0.464
KHS48387.1
methylmalonyl-CoA epimerase.
  
     0.454
KHS45010.1
Glyoxalase/bleomycin resistance protein/dioxygenase.
  
     0.450
KHS45623.1
acetyl-CoA acetyltransferase.
  
     0.442
KHS47041.1
Alpha/beta hydrolase.
  
     0.417
KHS42630.1
Thioesterase superfamily protein.
  
     0.416
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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