STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KHS45855.1Hypothetical protein. (106 aa)    
Predicted Functional Partners:
KHS45854.1
Peptidyl-prolyl cis-trans isomerase.
       0.814
KHS47046.1
AraC family transcriptional regulator.
  
     0.629
KHS48794.1
Toxic anion resistance.
  
     0.567
KHS49261.1
Hypothetical protein.
  
     0.465
KHS49260.1
Hypothetical protein.
  
     0.442
KHS43385.1
Ribonuclease II.
  
     0.437
KHS49259.1
Multiheme cytochrome.
  
     0.429
KHS46956.1
Ferric reductase like transmembrane component.
  
     0.429
KHS49262.1
Hypothetical protein.
  
     0.423
KHS46957.1
Cytochrome C family protein.
  
     0.411
Your Current Organism:
Novosphingobium subterraneum
NCBI taxonomy Id: 48936
Other names: ATCC 700279, CIP 105153, DSM 12447, IFO 16086, N. subterraneum, NBRC 16086, Novosphingobium subterraneae, SMCC B0478, Sphingomonas subterrae, Sphingomonas subterranea, Sphingomonas subterraneae, strain B0478
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.